WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M176.10a.1 Sequence Name  M176.10a.1
Length (nt)  1433   Chromosome Location  II: 9423312-9426176
Chromosome . Primary Identifier  II Chromosome Location . Start  9423312
Chromosome Location . End  9426176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M176.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010946 M176.10 M176.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M176.10a M176.10a 1365   II: 9423377-9423539

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M176.10a.1 9423312 9426176 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63690   228   II: 9423312-9423539 Caenorhabditis elegans
Exon63692   93   II: 9423585-9423677 Caenorhabditis elegans
Exon63694   57   II: 9423797-9423853 Caenorhabditis elegans
Exon63696   168   II: 9423926-9424093 Caenorhabditis elegans
Exon63697   33   II: 9424152-9424184 Caenorhabditis elegans
Exon63698   24   II: 9424283-9424306 Caenorhabditis elegans
Exon63700   105   II: 9424353-9424457 Caenorhabditis elegans
Exon63702   84   II: 9424518-9424601 Caenorhabditis elegans
Exon63704   63   II: 9424696-9424758 Caenorhabditis elegans
Exon63706   42   II: 9424908-9424949 Caenorhabditis elegans
Exon63708   51   II: 9425055-9425105 Caenorhabditis elegans
Exon63710   69   II: 9425154-9425222 Caenorhabditis elegans
Exon63712   72   II: 9425264-9425335 Caenorhabditis elegans
Exon63714   99   II: 9425401-9425499 Caenorhabditis elegans
Exon63716   84   II: 9425552-9425635 Caenorhabditis elegans
Exon63718   90   II: 9425754-9425843 Caenorhabditis elegans
Exon63721   71   II: 9426106-9426176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M176.10a.1 9423312 9426176 -1

1 Sequence

Length
1433

1 Sequence Ontology Term

Identifier Name Description
transcript