WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M176.10b.1 Sequence Name  M176.10b.1
Length (nt)  1230   Chromosome Location  II: 9423312-9426174
Chromosome . Primary Identifier  II Chromosome Location . Start  9423312
Chromosome Location . End  9426174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M176.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010946 M176.10 M176.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M176.10b M176.10b 1164   II: 9423377-9423539

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M176.10b.1 9423312 9426174 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63691   228   II: 9423312-9423539 Caenorhabditis elegans
Exon63693   93   II: 9423585-9423677 Caenorhabditis elegans
Exon63695   57   II: 9423797-9423853 Caenorhabditis elegans
Exon63699   24   II: 9424283-9424306 Caenorhabditis elegans
Exon63701   105   II: 9424353-9424457 Caenorhabditis elegans
Exon63703   84   II: 9424518-9424601 Caenorhabditis elegans
Exon63705   63   II: 9424696-9424758 Caenorhabditis elegans
Exon63707   42   II: 9424908-9424949 Caenorhabditis elegans
Exon63709   51   II: 9425055-9425105 Caenorhabditis elegans
Exon63711   69   II: 9425154-9425222 Caenorhabditis elegans
Exon63713   72   II: 9425264-9425335 Caenorhabditis elegans
Exon63715   99   II: 9425401-9425499 Caenorhabditis elegans
Exon63717   84   II: 9425552-9425635 Caenorhabditis elegans
Exon63719   90   II: 9425754-9425843 Caenorhabditis elegans
Exon63720   69   II: 9426106-9426174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M176.10b.1 9423312 9426174 -1

1 Sequence

Length
1230

1 Sequence Ontology Term

Identifier Name Description
transcript