WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19H5.3.1 Sequence Name  T19H5.3.1
Length (nt)  1388   Chromosome Location  II: 9477867-9479696
Chromosome . Primary Identifier  II Chromosome Location . Start  9477867
Chromosome Location . End  9479696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19H5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011848 chil-27 T19H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19H5.3 T19H5.3 1224   II: 9477871-9477923

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19H5.3.1 9477867 9479696 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63851   57   II: 9477867-9477923 Caenorhabditis elegans
Exon63852   444   II: 9477974-9478417 Caenorhabditis elegans
Exon63853   257   II: 9478464-9478720 Caenorhabditis elegans
Exon63854   36   II: 9478969-9479004 Caenorhabditis elegans
Exon63855   235   II: 9479053-9479287 Caenorhabditis elegans
Exon63856   359   II: 9479338-9479696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19H5.3.1 9477867 9479696 1

1 Sequence

Length
1388

1 Sequence Ontology Term

Identifier Name Description
transcript