WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:AH6.1.1 Sequence Name  AH6.1.1
Length (nt)  3414   Chromosome Location  II: 9512490-9516936
Chromosome . Primary Identifier  II Chromosome Location . Start  9512490
Chromosome Location . End  9516936 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AH6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001528 gcy-1 AH6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AH6.1 AH6.1 3414   II: 9512490-9512905

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:AH6.1.1 9512490 9516936 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63907   416   II: 9512490-9512905 Caenorhabditis elegans
Exon63908   104   II: 9512965-9513068 Caenorhabditis elegans
Exon63909   408   II: 9513112-9513519 Caenorhabditis elegans
Exon63910   178   II: 9513570-9513747 Caenorhabditis elegans
Exon63911   301   II: 9513794-9514094 Caenorhabditis elegans
Exon63912   657   II: 9514147-9514803 Caenorhabditis elegans
Exon63913   131   II: 9514856-9514986 Caenorhabditis elegans
Exon63914   139   II: 9515051-9515189 Caenorhabditis elegans
Exon63915   126   II: 9515240-9515365 Caenorhabditis elegans
Exon63916   98   II: 9515419-9515516 Caenorhabditis elegans
Exon63917   153   II: 9515567-9515719 Caenorhabditis elegans
Exon63918   230   II: 9515763-9515992 Caenorhabditis elegans
Exon63919   243   II: 9516037-9516279 Caenorhabditis elegans
Exon63920   131   II: 9516564-9516694 Caenorhabditis elegans
Exon63921   99   II: 9516838-9516936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:AH6.1.1 9512490 9516936 -1

1 Sequence

Length
3414

1 Sequence Ontology Term

Identifier Name Description
transcript