WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1307.5.2 Sequence Name  ZK1307.5.2
Length (nt)  1304   Chromosome Location  II: 9646978-9649362
Chromosome . Primary Identifier  II Chromosome Location . Start  9646978
Chromosome Location . End  9649362 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1307.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005026 sqv-8 ZK1307.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1307.5 ZK1307.5 1071   II: 9647938-9648075

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1307.5.2 9646978 9649362 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64162   46   II: 9646978-9647023 Caenorhabditis elegans
Exon64164   187   II: 9647889-9648075 Caenorhabditis elegans
Exon64166   104   II: 9648155-9648258 Caenorhabditis elegans
Exon64168   497   II: 9648305-9648801 Caenorhabditis elegans
Exon64169   470   II: 9648893-9649362 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1307.5.2 9646978 9649362 1

1 Sequence

Length
1304

1 Sequence Ontology Term

Identifier Name Description
transcript