WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1320.12a.1 Sequence Name  ZK1320.12a.1
Length (nt)  1615   Chromosome Location  II: 9669324-9671492
Chromosome . Primary Identifier  II Chromosome Location . Start  9669324
Chromosome Location . End  9671492 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1320.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006390 taf-8 ZK1320.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1320.12a ZK1320.12a 1488   II: 9669325-9669446

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1320.12a.1 9669324 9671492 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64231   123   II: 9669324-9669446 Caenorhabditis elegans
Exon64232   188   II: 9669492-9669679 Caenorhabditis elegans
Exon64234   168   II: 9669731-9669898 Caenorhabditis elegans
Exon64236   290   II: 9669945-9670234 Caenorhabditis elegans
Exon64238   135   II: 9670288-9670422 Caenorhabditis elegans
Exon64240   178   II: 9670472-9670649 Caenorhabditis elegans
Exon64242   296   II: 9670751-9671046 Caenorhabditis elegans
Exon64245   237   II: 9671256-9671492 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1320.12a.1 9669324 9671492 1

1 Sequence

Length
1615

1 Sequence Ontology Term

Identifier Name Description
transcript