WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53C12A.3.1 Sequence Name  Y53C12A.3.1
Length (nt)  976   Chromosome Location  II: 9704884-9706240
Chromosome . Primary Identifier  II Chromosome Location . Start  9704884
Chromosome Location . End  9706240 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C12A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013139 Y53C12A.3 Y53C12A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C12A.3 Y53C12A.3 813   II: 9705045-9705115

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12A.3.1 9704884 9706240 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64298   232   II: 9704884-9705115 Caenorhabditis elegans
Exon64299   124   II: 9705166-9705289 Caenorhabditis elegans
Exon64300   123   II: 9705339-9705461 Caenorhabditis elegans
Exon64301   142   II: 9705508-9705649 Caenorhabditis elegans
Exon64302   134   II: 9705718-9705851 Caenorhabditis elegans
Exon64303   96   II: 9705897-9705992 Caenorhabditis elegans
Exon64304   125   II: 9706116-9706240 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12A.3.1 9704884 9706240 -1

1 Sequence

Length
976

1 Sequence Ontology Term

Identifier Name Description
transcript