WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53C12A.1.1 Sequence Name  Y53C12A.1.1
Length (nt)  2404   Chromosome Location  II: 9713737-9716467
Chromosome . Primary Identifier  II Chromosome Location . Start  9713737
Chromosome Location . End  9716467 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C12A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006940 wee-1.3 Y53C12A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C12A.1 Y53C12A.1 2034   II: 9714102-9714134

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12A.1.1 9713737 9716467 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64315   398   II: 9713737-9714134 Caenorhabditis elegans
Exon64316   436   II: 9714183-9714618 Caenorhabditis elegans
Exon64317   314   II: 9714684-9714997 Caenorhabditis elegans
Exon64318   138   II: 9715044-9715181 Caenorhabditis elegans
Exon64319   348   II: 9715231-9715578 Caenorhabditis elegans
Exon64320   509   II: 9715627-9716135 Caenorhabditis elegans
Exon64321   261   II: 9716207-9716467 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12A.1.1 9713737 9716467 -1

1 Sequence

Length
2404

1 Sequence Ontology Term

Identifier Name Description
transcript