WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53C12B.5a.1 Sequence Name  Y53C12B.5a.1
Length (nt)  1791   Chromosome Location  II: 9732137-9738035
Chromosome . Primary Identifier  II Chromosome Location . Start  9732137
Chromosome Location . End  9738035 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C12B.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003100 mab-3 Y53C12B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C12B.5a Y53C12B.5a 873   II: 9733422-9733564

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12B.5a.1 9732137 9738035 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64340   166   II: 9732137-9732302 Caenorhabditis elegans
Exon64341   153   II: 9733412-9733564 Caenorhabditis elegans
Exon64343   79   II: 9735012-9735090 Caenorhabditis elegans
Exon64344   147   II: 9735769-9735915 Caenorhabditis elegans
Exon64347   172   II: 9736285-9736456 Caenorhabditis elegans
Exon64352   1074   II: 9736962-9738035 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12B.5a.1 9732137 9738035 1

1 Sequence

Length
1791

1 Sequence Ontology Term

Identifier Name Description
transcript