WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53C12B.5b.1 Sequence Name  Y53C12B.5b.1
Length (nt)  1464   Chromosome Location  II: 9735011-9738026
Chromosome . Primary Identifier  II Chromosome Location . Start  9735011
Chromosome Location . End  9738026 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C12B.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003100 mab-3 Y53C12B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C12B.5b Y53C12B.5b 474   II: 9736315-9736456

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12B.5b.1 9735011 9738026 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64342   80   II: 9735011-9735090 Caenorhabditis elegans
Exon64345   147   II: 9735769-9735915 Caenorhabditis elegans
Exon64348   172   II: 9736285-9736456 Caenorhabditis elegans
Exon64351   1065   II: 9736962-9738026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12B.5b.1 9735011 9738026 1

1 Sequence

Length
1464

1 Sequence Ontology Term

Identifier Name Description
transcript