WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1321.2e.1 Sequence Name  ZK1321.2e.1
Length (nt)  1347   Chromosome Location  II: 9763355-9767987
Chromosome . Primary Identifier  II Chromosome Location . Start  9763355
Chromosome Location . End  9767987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1321.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014261 shk-1 ZK1321.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1321.2e ZK1321.2e 1347   II: 9763355-9763380

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1321.2e.1 9763355 9767987 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64424   26   II: 9763355-9763380 Caenorhabditis elegans
Exon64429   120   II: 9765426-9765545 Caenorhabditis elegans
Exon64435   84   II: 9765687-9765770 Caenorhabditis elegans
Exon64441   93   II: 9765815-9765907 Caenorhabditis elegans
Exon64449   100   II: 9766352-9766451 Caenorhabditis elegans
Exon64455   173   II: 9766607-9766779 Caenorhabditis elegans
Exon64461   158   II: 9766830-9766987 Caenorhabditis elegans
Exon64467   109   II: 9767032-9767140 Caenorhabditis elegans
Exon64473   93   II: 9767187-9767279 Caenorhabditis elegans
Exon64479   181   II: 9767328-9767508 Caenorhabditis elegans
Exon64485   20   II: 9767594-9767613 Caenorhabditis elegans
Exon64491   100   II: 9767724-9767823 Caenorhabditis elegans
Exon64495   90   II: 9767898-9767987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1321.2e.1 9763355 9767987 1

1 Sequence

Length
1347

1 Sequence Ontology Term

Identifier Name Description
transcript