WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B9.8.1 Sequence Name  T10B9.8.1
Length (nt)  1771   Chromosome Location  II: 9779181-9781997
Chromosome . Primary Identifier  II Chromosome Location . Start  9779181
Chromosome Location . End  9781997 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011677 cyp-13A1 T10B9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B9.8 T10B9.8 1560   II: 9779345-9779585

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B9.8.1 9779181 9781997 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64536   405   II: 9779181-9779585 Caenorhabditis elegans
Exon64538   71   II: 9779638-9779708 Caenorhabditis elegans
Exon64540   73   II: 9779824-9779896 Caenorhabditis elegans
Exon64542   257   II: 9779981-9780237 Caenorhabditis elegans
Exon64544   297   II: 9780292-9780588 Caenorhabditis elegans
Exon64546   100   II: 9780637-9780736 Caenorhabditis elegans
Exon64548   93   II: 9780837-9780929 Caenorhabditis elegans
Exon64550   239   II: 9780979-9781217 Caenorhabditis elegans
Exon64552   136   II: 9781578-9781713 Caenorhabditis elegans
Exon64555   100   II: 9781898-9781997 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B9.8.1 9779181 9781997 -1

1 Sequence

Length
1771

1 Sequence Ontology Term

Identifier Name Description
transcript