WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53C12C.1.1 Sequence Name  Y53C12C.1.1
Length (nt)  1036   Chromosome Location  II: 9826448-9827952
Chromosome . Primary Identifier  II Chromosome Location . Start  9826448
Chromosome Location . End  9827952 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C12C.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013147 eyg-1 Y53C12C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C12C.1 Y53C12C.1 945   II: 9826513-9826820

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12C.1.1 9826448 9827952 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64617   373   II: 9826448-9826820 Caenorhabditis elegans
Exon64618   384   II: 9826907-9827290 Caenorhabditis elegans
Exon64619   97   II: 9827562-9827658 Caenorhabditis elegans
Exon64620   107   II: 9827711-9827817 Caenorhabditis elegans
Exon64621   75   II: 9827878-9827952 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12C.1.1 9826448 9827952 -1

1 Sequence

Length
1036

1 Sequence Ontology Term

Identifier Name Description
transcript