WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26C11.3a.1 Sequence Name  F26C11.3a.1
Length (nt)  3750   Chromosome Location  II: 9903059-9915099
Chromosome . Primary Identifier  II Chromosome Location . Start  9903059
Chromosome Location . End  9915099 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26C11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009147 F26C11.3 F26C11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26C11.3a F26C11.3a 3750   II: 9903059-9903081

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26C11.3a.1 9903059 9915099 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64822   23   II: 9903059-9903081 Caenorhabditis elegans
Exon64823   247   II: 9903130-9903376 Caenorhabditis elegans
Exon64829   117   II: 9903424-9903540 Caenorhabditis elegans
Exon64835   111   II: 9903586-9903696 Caenorhabditis elegans
Exon64841   60   II: 9903786-9903845 Caenorhabditis elegans
Exon64847   117   II: 9904034-9904150 Caenorhabditis elegans
Exon64853   84   II: 9904198-9904281 Caenorhabditis elegans
Exon64859   117   II: 9904333-9904449 Caenorhabditis elegans
Exon64865   90   II: 9904495-9904584 Caenorhabditis elegans
Exon64871   117   II: 9904641-9904757 Caenorhabditis elegans
Exon64877   123   II: 9904804-9904926 Caenorhabditis elegans
Exon64883   117   II: 9905063-9905179 Caenorhabditis elegans
Exon64889   144   II: 9905229-9905372 Caenorhabditis elegans
Exon64895   117   II: 9905421-9905537 Caenorhabditis elegans
Exon64901   132   II: 9905585-9905716 Caenorhabditis elegans
Exon64907   117   II: 9905767-9905883 Caenorhabditis elegans
Exon64913   132   II: 9905936-9906067 Caenorhabditis elegans
Exon64919   117   II: 9906119-9906235 Caenorhabditis elegans
Exon64925   138   II: 9906284-9906421 Caenorhabditis elegans
Exon64931   117   II: 9906475-9906591 Caenorhabditis elegans
Exon64937   111   II: 9906637-9906747 Caenorhabditis elegans
Exon64943   44   II: 9906821-9906864 Caenorhabditis elegans
Exon64949   324   II: 9906914-9907237 Caenorhabditis elegans
Exon64955   192   II: 9907320-9907511 Caenorhabditis elegans
Exon64961   291   II: 9907555-9907845 Caenorhabditis elegans
Exon64967   210   II: 9908214-9908423 Caenorhabditis elegans
Exon64978   241   II: 9914859-9915099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26C11.3a.1 9903059 9915099 -1

1 Sequence

Length
3750

1 Sequence Ontology Term

Identifier Name Description
transcript