WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05C10.2b.1 Sequence Name  C05C10.2b.1
Length (nt)  4902   Chromosome Location  II: 9922225-9930830
Chromosome . Primary Identifier  II Chromosome Location . Start  9922225
Chromosome Location . End  9930830 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05C10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007329 C05C10.2 C05C10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05C10.2b C05C10.2b 4578   II: 9922226-9922260

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05C10.2b.1 9922225 9930830 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64989   36   II: 9922225-9922260 Caenorhabditis elegans
Exon64991   115   II: 9922378-9922492 Caenorhabditis elegans
Exon64993   144   II: 9922776-9922919 Caenorhabditis elegans
Exon64995   72   II: 9923010-9923081 Caenorhabditis elegans
Exon65001   135   II: 9924798-9924932 Caenorhabditis elegans
Exon65006   882   II: 9924978-9925859 Caenorhabditis elegans
Exon65011   2940   II: 9926110-9929049 Caenorhabditis elegans
Exon65016   195   II: 9930137-9930331 Caenorhabditis elegans
Exon65022   383   II: 9930448-9930830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05C10.2b.1 9922225 9930830 1

1 Sequence

Length
4902

1 Sequence Ontology Term

Identifier Name Description
transcript