WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05C10.2c.2 Sequence Name  C05C10.2c.2
Length (nt)  4488   Chromosome Location  II: 9924606-9930696
Chromosome . Primary Identifier  II Chromosome Location . Start  9924606
Chromosome Location . End  9930696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05C10.2c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007329 C05C10.2 C05C10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05C10.2c C05C10.2c 4215   II: 9924690-9924692

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05C10.2c.2 9924606 9930696 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64998   87   II: 9924606-9924692 Caenorhabditis elegans
Exon65003   135   II: 9924798-9924932 Caenorhabditis elegans
Exon65008   882   II: 9924978-9925859 Caenorhabditis elegans
Exon65013   2940   II: 9926110-9929049 Caenorhabditis elegans
Exon65018   195   II: 9930137-9930331 Caenorhabditis elegans
Exon65020   249   II: 9930448-9930696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05C10.2c.2 9924606 9930696 1

1 Sequence

Length
4488

1 Sequence Ontology Term

Identifier Name Description
transcript