WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05C10.4.1 Sequence Name  C05C10.4.1
Length (nt)  1323   Chromosome Location  II: 9931849-9934431
Chromosome . Primary Identifier  II Chromosome Location . Start  9931849
Chromosome Location . End  9934431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05C10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007331 pho-11 C05C10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05C10.4 C05C10.4 1242   II: 9931863-9931955

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05C10.4.1 9931849 9934431 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65033   107   II: 9931849-9931955 Caenorhabditis elegans
Exon65034   195   II: 9932041-9932235 Caenorhabditis elegans
Exon65036   94   II: 9932283-9932376 Caenorhabditis elegans
Exon65038   83   II: 9932597-9932679 Caenorhabditis elegans
Exon65040   90   II: 9932774-9932863 Caenorhabditis elegans
Exon65042   208   II: 9933150-9933357 Caenorhabditis elegans
Exon65044   176   II: 9933402-9933577 Caenorhabditis elegans
Exon65046   141   II: 9933971-9934111 Caenorhabditis elegans
Exon65048   141   II: 9934157-9934297 Caenorhabditis elegans
Exon65051   88   II: 9934344-9934431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05C10.4.1 9931849 9934431 1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
transcript