WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R53.1d.1 Sequence Name  R53.1d.1
Length (nt)  1116   Chromosome Location  II: 9945676-9946986
Chromosome . Primary Identifier  II Chromosome Location . Start  9945676
Chromosome Location . End  9946986 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R53.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011271 flad-1 R53.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R53.1d R53.1d 1116   II: 9945676-9945965

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R53.1d.1 9945676 9946986 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65098   290   II: 9945676-9945965 Caenorhabditis elegans
Exon65102   321   II: 9946015-9946335 Caenorhabditis elegans
Exon65106   96   II: 9946386-9946481 Caenorhabditis elegans
Exon65110   265   II: 9946530-9946794 Caenorhabditis elegans
Exon65113   144   II: 9946843-9946986 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R53.1d.1 9945676 9946986 1

1 Sequence

Length
1116

1 Sequence Ontology Term

Identifier Name Description
transcript