WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R53.3b.2 Sequence Name  R53.3b.2
Length (nt)  1938   Chromosome Location  II: 9960231-9963020
Chromosome . Primary Identifier  II Chromosome Location . Start  9960231
Chromosome Location . End  9963020 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R53.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001207 egl-43 R53.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R53.3b R53.3b 969   II: 9960333-9960485

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R53.3b.2 9960231 9963020 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65129   255   II: 9960231-9960485 Caenorhabditis elegans
Exon65135   98   II: 9960939-9961036 Caenorhabditis elegans
Exon65139   505   II: 9961187-9961691 Caenorhabditis elegans
Exon65143   72   II: 9961829-9961900 Caenorhabditis elegans
Exon65147   1008   II: 9962013-9963020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R53.3b.2 9960231 9963020 1

1 Sequence

Length
1938

1 Sequence Ontology Term

Identifier Name Description
transcript