WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R53.4.1 Sequence Name  R53.4.1
Length (nt)  663   Chromosome Location  II: 9967277-9968049
Chromosome . Primary Identifier  II Chromosome Location . Start  9967277
Chromosome Location . End  9968049 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R53.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011273 R53.4 R53.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R53.4 R53.4 462   II: 9967476-9967577

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R53.4.1 9967277 9968049 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65161   301   II: 9967277-9967577 Caenorhabditis elegans
Exon65162   244   II: 9967624-9967867 Caenorhabditis elegans
Exon65163   118   II: 9967932-9968049 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R53.4.1 9967277 9968049 -1

1 Sequence

Length
663

1 Sequence Ontology Term

Identifier Name Description
transcript