WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R53.5.1 Sequence Name  R53.5.1
Length (nt)  736   Chromosome Location  II: 9969620-9970488
Chromosome . Primary Identifier  II Chromosome Location . Start  9969620
Chromosome Location . End  9970488 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R53.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011274 R53.5 R53.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R53.5 R53.5 660   II: 9969693-9969814

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R53.5.1 9969620 9970488 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65165   195   II: 9969620-9969814 Caenorhabditis elegans
Exon65166   220   II: 9969859-9970078 Caenorhabditis elegans
Exon65167   132   II: 9970123-9970254 Caenorhabditis elegans
Exon65168   189   II: 9970300-9970488 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R53.5.1 9969620 9970488 -1

1 Sequence

Length
736

1 Sequence Ontology Term

Identifier Name Description
transcript