WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R53.8 Sequence Name  R53.8
Length (nt)  555   Chromosome Location  II: 9976705-9976834
Chromosome . Primary Identifier  II Chromosome Location . Start  9976705
Chromosome Location . End  9976834
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R53.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03578 R53.8 20.7 184 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052043
WBRNAi00017914
WBRNAi00034972

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R53.8 9976705 9976834 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011277 R53.8 R53.8 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:R53.8 9976705 9976834 1
CDS:R53.8 9977408 9977832 1

1 Sequence

Length
555

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R53.8.1 R53.8.1 600   II: 9976705-9977877