WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK892.1f.1 Sequence Name  ZK892.1f.1
Length (nt)  1014   Chromosome Location  II: 9991160-9999984
Chromosome . Primary Identifier  II Chromosome Location . Start  9991160
Chromosome Location . End  9999984 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK892.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002266 lec-3 ZK892.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK892.1f ZK892.1f 1014   II: 9991160-9991239

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1f.1 9991160 9999984 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65195   80   II: 9991160-9991239 Caenorhabditis elegans
Exon65199   61   II: 9991369-9991429 Caenorhabditis elegans
Exon65215   89   II: 9994276-9994364 Caenorhabditis elegans
Exon65224   88   II: 9994419-9994506 Caenorhabditis elegans
Exon65233   132   II: 9995620-9995751 Caenorhabditis elegans
Exon65241   108   II: 9997979-9998086 Caenorhabditis elegans
Exon65249   92   II: 9998375-9998466 Caenorhabditis elegans
Exon65257   70   II: 9998512-9998581 Caenorhabditis elegans
Exon65261   36   II: 9998694-9998729 Caenorhabditis elegans
Exon65272   123   II: 9999202-9999324 Caenorhabditis elegans
Exon65273   135   II: 9999850-9999984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1f.1 9991160 9999984 1

1 Sequence

Length
1014

1 Sequence Ontology Term

Identifier Name Description
transcript