WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK892.1d.1 Sequence Name  ZK892.1d.1
Length (nt)  1587   Chromosome Location  II: 9993650-10000348
Chromosome . Primary Identifier  II Chromosome Location . Start  9993650
Chromosome Location . End  10000348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK892.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002266 lec-3 ZK892.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK892.1d ZK892.1d 939   II: 9993934-9993966

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1d.1 9993650 10000348 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65205   317   II: 9993650-9993966 Caenorhabditis elegans
Exon65214   89   II: 9994276-9994364 Caenorhabditis elegans
Exon65222   88   II: 9994419-9994506 Caenorhabditis elegans
Exon65232   132   II: 9995620-9995751 Caenorhabditis elegans
Exon65240   108   II: 9997979-9998086 Caenorhabditis elegans
Exon65248   92   II: 9998375-9998466 Caenorhabditis elegans
Exon65256   70   II: 9998512-9998581 Caenorhabditis elegans
Exon65260   36   II: 9998694-9998729 Caenorhabditis elegans
Exon65265   33   II: 9998999-9999031 Caenorhabditis elegans
Exon65271   123   II: 9999202-9999324 Caenorhabditis elegans
Exon65276   499   II: 9999850-10000348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1d.1 9993650 10000348 1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript