WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H3.6.1 Sequence Name  F52H3.6.1
Length (nt)  1612   Chromosome Location  II: 10026587-10028422
Chromosome . Primary Identifier  II Chromosome Location . Start  10026587
Chromosome Location . End  10028422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009948 F52H3.6 F52H3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H3.6 F52H3.6 990   II: 10026650-10026904

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.6.1 10026587 10028422 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65337   318   II: 10026587-10026904 Caenorhabditis elegans
Exon65338   288   II: 10026951-10027238 Caenorhabditis elegans
Exon65339   279   II: 10027286-10027564 Caenorhabditis elegans
Exon65340   128   II: 10027643-10027770 Caenorhabditis elegans
Exon65341   599   II: 10027824-10028422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.6.1 10026587 10028422 -1

1 Sequence

Length
1612

1 Sequence Ontology Term

Identifier Name Description
transcript