WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H3.5.1 Sequence Name  F52H3.5.1
Length (nt)  634   Chromosome Location  II: 10030190-10030970
Chromosome . Primary Identifier  II Chromosome Location . Start  10030190
Chromosome Location . End  10030970 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009947 ttc-36 F52H3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H3.5 F52H3.5 540   II: 10030206-10030408

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.5.1 10030190 10030970 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65343   219   II: 10030190-10030408 Caenorhabditis elegans
Exon65344   80   II: 10030461-10030540 Caenorhabditis elegans
Exon65345   122   II: 10030592-10030713 Caenorhabditis elegans
Exon65346   213   II: 10030758-10030970 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.5.1 10030190 10030970 1

1 Sequence

Length
634

1 Sequence Ontology Term

Identifier Name Description
transcript