WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52H3.1 Sequence Name  F52H3.1
Length (nt)  2193   Chromosome Location  II: 10033448-10033548
Chromosome . Primary Identifier  II Chromosome Location . Start  10033448
Chromosome Location . End  10033548
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03397 LET-268 84.4 730 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00008830
WBRNAi00048028
WBRNAi00071201
WBRNAi00071202
WBRNAi00025572
WBRNAi00062665
WBRNAi00032642
WBRNAi00115624

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52H3.1 10033448 10033548 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002497 let-268 F52H3.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52H3.1 10033448 10033548 -1
CDS:F52H3.1 10035229 10035412 -1
CDS:F52H3.1 10035460 10035606 -1
CDS:F52H3.1 10035652 10035825 -1
CDS:F52H3.1 10035870 10036118 -1
CDS:F52H3.1 10036172 10036310 -1
CDS:F52H3.1 10036359 10036472 -1
CDS:F52H3.1 10036917 10037791 -1
CDS:F52H3.1 10037908 10038117 -1

1 Sequence

Length
2193

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52H3.1.3 F52H3.1.3 2396   II: 10033266-10038473
Transcript:F52H3.1.2 F52H3.1.2 2459   II: 10033266-10039940
Transcript:F52H3.1.4 F52H3.1.4 2384   II: 10033266-10038126
Transcript:F52H3.1.1 F52H3.1.1 2531   II: 10033266-10039980