WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18D1.4.1 Sequence Name  C18D1.4.1
Length (nt)  1189   Chromosome Location  II: 10056301-10060660
Chromosome . Primary Identifier  II Chromosome Location . Start  10056301
Chromosome Location . End  10060660 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18D1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007670 stg-1 C18D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18D1.4 C18D1.4 1101   II: 10056311-10056590

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18D1.4.1 10056301 10060660 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65410   290   II: 10056301-10056590 Caenorhabditis elegans
Exon65411   74   II: 10056650-10056723 Caenorhabditis elegans
Exon65417   117   II: 10059039-10059155 Caenorhabditis elegans
Exon65418   137   II: 10059215-10059351 Caenorhabditis elegans
Exon65419   141   II: 10059408-10059548 Caenorhabditis elegans
Exon65420   78   II: 10059692-10059769 Caenorhabditis elegans
Exon65421   156   II: 10060057-10060212 Caenorhabditis elegans
Exon65422   196   II: 10060465-10060660 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18D1.4.1 10056301 10060660 -1

1 Sequence

Length
1189

1 Sequence Ontology Term

Identifier Name Description
transcript