WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK945.9.1 Sequence Name  ZK945.9.1
Length (nt)  10034   Chromosome Location  II: 10109100-10121825
Chromosome . Primary Identifier  II Chromosome Location . Start  10109100
Chromosome Location . End  10121825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK945.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003058 lov-1 ZK945.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK945.9 ZK945.9 9855   II: 10109279-10109548

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK945.9.1 10109100 10121825 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65492   449   II: 10109100-10109548 Caenorhabditis elegans
Exon65493   244   II: 10109607-10109850 Caenorhabditis elegans
Exon65495   375   II: 10109903-10110277 Caenorhabditis elegans
Exon65496   549   II: 10110321-10110869 Caenorhabditis elegans
Exon65497   296   II: 10110913-10111208 Caenorhabditis elegans
Exon65499   206   II: 10111254-10111459 Caenorhabditis elegans
Exon65500   866   II: 10111507-10112372 Caenorhabditis elegans
Exon65501   993   II: 10112614-10113606 Caenorhabditis elegans
Exon65502   269   II: 10113661-10113929 Caenorhabditis elegans
Exon65503   102   II: 10113976-10114077 Caenorhabditis elegans
Exon65504   228   II: 10114127-10114354 Caenorhabditis elegans
Exon65505   122   II: 10114402-10114523 Caenorhabditis elegans
Exon65506   134   II: 10114577-10114710 Caenorhabditis elegans
Exon65507   200   II: 10114760-10114959 Caenorhabditis elegans
Exon65508   227   II: 10115010-10115236 Caenorhabditis elegans
Exon65509   250   II: 10115284-10115533 Caenorhabditis elegans
Exon65510   294   II: 10115583-10115876 Caenorhabditis elegans
Exon65511   81   II: 10115926-10116006 Caenorhabditis elegans
Exon65512   1013   II: 10116052-10117064 Caenorhabditis elegans
Exon65514   168   II: 10117108-10117275 Caenorhabditis elegans
Exon65515   79   II: 10117835-10117913 Caenorhabditis elegans
Exon65516   578   II: 10117963-10118540 Caenorhabditis elegans
Exon65517   79   II: 10118590-10118668 Caenorhabditis elegans
Exon65518   548   II: 10118714-10119261 Caenorhabditis elegans
Exon65519   79   II: 10119416-10119494 Caenorhabditis elegans
Exon65520   632   II: 10119546-10120177 Caenorhabditis elegans
Exon65521   325   II: 10120406-10120730 Caenorhabditis elegans
Exon65522   140   II: 10120776-10120915 Caenorhabditis elegans
Exon65523   141   II: 10120961-10121101 Caenorhabditis elegans
Exon65524   133   II: 10121363-10121495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK945.9.1 10109100 10121825 -1

1 Sequence

Length
10034

1 Sequence Ontology Term

Identifier Name Description
transcript