WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33H1.1b.1 Sequence Name  F33H1.1b.1
Length (nt)  2874   Chromosome Location  II: 10157521-10169345
Chromosome . Primary Identifier  II Chromosome Location . Start  10157521
Chromosome Location . End  10169345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33H1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33H1.1b F33H1.1b 2418   II: 10157953-10158087

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1b.1 10157521 10169345 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65568   567   II: 10157521-10158087 Caenorhabditis elegans
Exon65573   871   II: 10158138-10159008 Caenorhabditis elegans
Exon65578   213   II: 10159065-10159277 Caenorhabditis elegans
Exon65583   342   II: 10159326-10159667 Caenorhabditis elegans
Exon65588   77   II: 10159745-10159821 Caenorhabditis elegans
Exon65593   132   II: 10160797-10160928 Caenorhabditis elegans
Exon65598   67   II: 10160977-10161043 Caenorhabditis elegans
Exon65605   82   II: 10163497-10163578 Caenorhabditis elegans
Exon65608   75   II: 10164312-10164386 Caenorhabditis elegans
Exon65611   167   II: 10166141-10166307 Caenorhabditis elegans
Exon65613   189   II: 10168074-10168262 Caenorhabditis elegans
Exon65614   92   II: 10169254-10169345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1b.1 10157521 10169345 -1

1 Sequence

Length
2874

1 Sequence Ontology Term

Identifier Name Description
transcript