WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33H1.1a.1 Sequence Name  F33H1.1a.1
Length (nt)  2799   Chromosome Location  II: 10157522-10169346
Chromosome . Primary Identifier  II Chromosome Location . Start  10157522
Chromosome Location . End  10169346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33H1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33H1.1a F33H1.1a 2343   II: 10157953-10158087

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1a.1 10157522 10169346 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65569   566   II: 10157522-10158087 Caenorhabditis elegans
Exon65572   871   II: 10158138-10159008 Caenorhabditis elegans
Exon65577   213   II: 10159065-10159277 Caenorhabditis elegans
Exon65582   342   II: 10159326-10159667 Caenorhabditis elegans
Exon65587   77   II: 10159745-10159821 Caenorhabditis elegans
Exon65592   132   II: 10160797-10160928 Caenorhabditis elegans
Exon65597   67   II: 10160977-10161043 Caenorhabditis elegans
Exon65604   82   II: 10163497-10163578 Caenorhabditis elegans
Exon65610   167   II: 10166141-10166307 Caenorhabditis elegans
Exon65612   189   II: 10168074-10168262 Caenorhabditis elegans
Exon65615   93   II: 10169254-10169346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1a.1 10157522 10169346 -1

1 Sequence

Length
2799

1 Sequence Ontology Term

Identifier Name Description
transcript