WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33H1.1c.1 Sequence Name  F33H1.1c.1
Length (nt)  2035   Chromosome Location  II: 10157953-10161673
Chromosome . Primary Identifier  II Chromosome Location . Start  10157953
Chromosome Location . End  10161673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33H1.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33H1.1c F33H1.1c 1869   II: 10157953-10158087

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1c.1 10157953 10161673 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65570   135   II: 10157953-10158087 Caenorhabditis elegans
Exon65574   871   II: 10158138-10159008 Caenorhabditis elegans
Exon65579   213   II: 10159065-10159277 Caenorhabditis elegans
Exon65584   342   II: 10159326-10159667 Caenorhabditis elegans
Exon65589   77   II: 10159745-10159821 Caenorhabditis elegans
Exon65594   132   II: 10160797-10160928 Caenorhabditis elegans
Exon65599   67   II: 10160977-10161043 Caenorhabditis elegans
Exon65602   198   II: 10161476-10161673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1c.1 10157953 10161673 -1

1 Sequence

Length
2035

1 Sequence Ontology Term

Identifier Name Description
transcript