WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33H1.4.1 Sequence Name  F33H1.4.1
Length (nt)  4541   Chromosome Location  II: 10174648-10180040
Chromosome . Primary Identifier  II Chromosome Location . Start  10174648
Chromosome Location . End  10180040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33H1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009365 gsox-1 F33H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33H1.4 F33H1.4 4137   II: 10174674-10174701

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.4.1 10174648 10180040 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65624   54   II: 10174648-10174701 Caenorhabditis elegans
Exon65625   214   II: 10174930-10175143 Caenorhabditis elegans
Exon65626   1832   II: 10175196-10177027 Caenorhabditis elegans
Exon65627   968   II: 10177307-10178274 Caenorhabditis elegans
Exon65628   927   II: 10178470-10179396 Caenorhabditis elegans
Exon65629   60   II: 10179445-10179504 Caenorhabditis elegans
Exon65630   486   II: 10179555-10180040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.4.1 10174648 10180040 1

1 Sequence

Length
4541

1 Sequence Ontology Term

Identifier Name Description
transcript