WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05H5.5 Sequence Name  R05H5.5
Length (nt)  711   Chromosome Location  II: 10199951-10200162
Chromosome . Primary Identifier  II Chromosome Location . Start  10199951
Chromosome Location . End  10200162
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05H5.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02292 ARV-1 27.6 236 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051347
WBRNAi00034641
WBRNAi00009036

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05H5.5 10199951 10200162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011040 arv-1 R05H5.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05H5.5 10199951 10200162 -1
CDS:R05H5.5 10200217 10200350 -1
CDS:R05H5.5 10200402 10200628 -1
CDS:R05H5.5 10200678 10200815 -1

1 Sequence

Length
711

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05H5.5.1 R05H5.5.1 860   II: 10199810-10200823