WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01E8.1.1 Sequence Name  T01E8.1.1
Length (nt)  1771   Chromosome Location  II: 10206725-10209261
Chromosome . Primary Identifier  II Chromosome Location . Start  10206725
Chromosome Location . End  10209261 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01E8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011331 T01E8.1 T01E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01E8.1 T01E8.1 1551   II: 10206776-10206901

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.1.1 10206725 10209261 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65680   177   II: 10206725-10206901 Caenorhabditis elegans
Exon65681   315   II: 10206950-10207264 Caenorhabditis elegans
Exon65683   132   II: 10207785-10207916 Caenorhabditis elegans
Exon65684   114   II: 10207967-10208080 Caenorhabditis elegans
Exon65685   234   II: 10208126-10208359 Caenorhabditis elegans
Exon65686   443   II: 10208408-10208850 Caenorhabditis elegans
Exon65687   356   II: 10208906-10209261 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.1.1 10206725 10209261 1

1 Sequence

Length
1771

1 Sequence Ontology Term

Identifier Name Description
transcript