WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01E8.3.1 Sequence Name  T01E8.3.1
Length (nt)  4427   Chromosome Location  II: 10222877-10229440
Chromosome . Primary Identifier  II Chromosome Location . Start  10222877
Chromosome Location . End  10229440 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01E8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004038 plc-3 T01E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01E8.3 T01E8.3 4053   II: 10222878-10223173

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.3.1 10222877 10229440 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65693   297   II: 10222877-10223173 Caenorhabditis elegans
Exon65694   185   II: 10223222-10223406 Caenorhabditis elegans
Exon65695   151   II: 10223459-10223609 Caenorhabditis elegans
Exon65696   474   II: 10223656-10224129 Caenorhabditis elegans
Exon65697   86   II: 10224182-10224267 Caenorhabditis elegans
Exon65698   369   II: 10224319-10224687 Caenorhabditis elegans
Exon65699   429   II: 10224763-10225191 Caenorhabditis elegans
Exon65700   699   II: 10225289-10225987 Caenorhabditis elegans
Exon65704   141   II: 10227265-10227405 Caenorhabditis elegans
Exon65705   639   II: 10227696-10228334 Caenorhabditis elegans
Exon65706   293   II: 10228398-10228690 Caenorhabditis elegans
Exon65707   191   II: 10228733-10228923 Caenorhabditis elegans
Exon65708   473   II: 10228968-10229440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.3.1 10222877 10229440 1

1 Sequence

Length
4427

1 Sequence Ontology Term

Identifier Name Description
transcript