WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01E8.4.1 Sequence Name  T01E8.4.1
Length (nt)  1365   Chromosome Location  II: 10236936-10239695
Chromosome . Primary Identifier  II Chromosome Location . Start  10236936
Chromosome Location . End  10239695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01E8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003177 mec-15 T01E8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01E8.4 T01E8.4 1221   II: 10237073-10237160

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.4.1 10236936 10239695 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65715   225   II: 10236936-10237160 Caenorhabditis elegans
Exon65716   80   II: 10237603-10237682 Caenorhabditis elegans
Exon65717   87   II: 10238007-10238093 Caenorhabditis elegans
Exon65718   126   II: 10238139-10238264 Caenorhabditis elegans
Exon65719   678   II: 10238801-10239478 Caenorhabditis elegans
Exon65720   169   II: 10239527-10239695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.4.1 10236936 10239695 -1

1 Sequence

Length
1365

1 Sequence Ontology Term

Identifier Name Description
transcript