WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B3.1b.1 Sequence Name  F54B3.1b.1
Length (nt)  11048   Chromosome Location  II: 10251266-10268213
Chromosome . Primary Identifier  II Chromosome Location . Start  10251266
Chromosome Location . End  10268213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010013 F54B3.1 F54B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B3.1b F54B3.1b 10692   II: 10251294-10251352

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54B3.1b.1 10251266 10268213 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65741   87   II: 10251266-10251352 Caenorhabditis elegans
Exon65744   292   II: 10251517-10251808 Caenorhabditis elegans
Exon65746   171   II: 10251993-10252163 Caenorhabditis elegans
Exon65748   478   II: 10252210-10252687 Caenorhabditis elegans
Exon65750   540   II: 10253276-10253815 Caenorhabditis elegans
Exon65752   385   II: 10254203-10254587 Caenorhabditis elegans
Exon65754   561   II: 10255155-10255715 Caenorhabditis elegans
Exon65756   574   II: 10256268-10256841 Caenorhabditis elegans
Exon65758   2951   II: 10257101-10260051 Caenorhabditis elegans
Exon65760   135   II: 10260720-10260854 Caenorhabditis elegans
Exon65762   1285   II: 10260904-10262188 Caenorhabditis elegans
Exon65764   143   II: 10262882-10263024 Caenorhabditis elegans
Exon65766   503   II: 10263079-10263581 Caenorhabditis elegans
Exon65768   1268   II: 10264053-10265320 Caenorhabditis elegans
Exon65770   197   II: 10265483-10265679 Caenorhabditis elegans
Exon65772   451   II: 10265736-10266186 Caenorhabditis elegans
Exon65774   187   II: 10266653-10266839 Caenorhabditis elegans
Exon65776   86   II: 10266887-10266972 Caenorhabditis elegans
Exon65778   87   II: 10267025-10267111 Caenorhabditis elegans
Exon65780   667   II: 10267547-10268213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54B3.1b.1 10251266 10268213 1

1 Sequence

Length
11048

1 Sequence Ontology Term

Identifier Name Description
transcript