WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK970.6.1 Sequence Name  ZK970.6.1
Length (nt)  3369   Chromosome Location  II: 10310400-10316219
Chromosome . Primary Identifier  II Chromosome Location . Start  10310400
Chromosome Location . End  10316219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK970.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001532 gcy-5 ZK970.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK970.6 ZK970.6 3369   II: 10310400-10310800

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK970.6.1 10310400 10316219 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65879   401   II: 10310400-10310800 Caenorhabditis elegans
Exon65880   104   II: 10310851-10310954 Caenorhabditis elegans
Exon65881   408   II: 10311006-10311413 Caenorhabditis elegans
Exon65882   175   II: 10311809-10311983 Caenorhabditis elegans
Exon65885   301   II: 10312943-10313243 Caenorhabditis elegans
Exon65886   654   II: 10313300-10313953 Caenorhabditis elegans
Exon65887   125   II: 10314016-10314140 Caenorhabditis elegans
Exon65888   139   II: 10314275-10314413 Caenorhabditis elegans
Exon65889   126   II: 10314586-10314711 Caenorhabditis elegans
Exon65890   95   II: 10314756-10314850 Caenorhabditis elegans
Exon65891   383   II: 10314915-10315297 Caenorhabditis elegans
Exon65893   243   II: 10315652-10315894 Caenorhabditis elegans
Exon65894   131   II: 10315940-10316070 Caenorhabditis elegans
Exon65895   84   II: 10316136-10316219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK970.6.1 10310400 10316219 -1

1 Sequence

Length
3369

1 Sequence Ontology Term

Identifier Name Description
transcript