WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07E3.1a Sequence Name  C07E3.1a
Length (nt)  2493   Chromosome Location  II: 10347143-10347507
Chromosome . Primary Identifier  II Chromosome Location . Start  10347143
Chromosome Location . End  10347507
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07E3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41502 STIP-1, isoform a 94.3 830 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00039999
WBRNAi00075212
WBRNAi00072918
WBRNAi00072920
WBRNAi00083691
WBRNAi00083587
WBRNAi00083781
WBRNAi00075213
WBRNAi00028630
WBRNAi00072919
WBRNAi00008360
WBRNAi00080054
WBRNAi00065825
WBRNAi00106655
WBRNAi00080055
WBRNAi00080141
WBRNAi00083503
WBRNAi00083536

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07E3.1a 10347143 10347507 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007412 stip-1 C07E3.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07E3.1a 10347143 10347507 -1
CDS:C07E3.1a 10347555 10347678 -1
CDS:C07E3.1a 10347728 10348290 -1
CDS:C07E3.1a 10348342 10349129 -1
CDS:C07E3.1a 10349196 10349672 -1
CDS:C07E3.1a 10349722 10349785 -1
CDS:C07E3.1a 10349894 10350005 -1

1 Sequence

Length
2493

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07E3.1a.1 C07E3.1a.1 2551   II: 10347085-10350005