WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07E3.5.2 Sequence Name  C07E3.5.2
Length (nt)  2485   Chromosome Location  II: 10363584-10367296
Chromosome . Primary Identifier  II Chromosome Location . Start  10363584
Chromosome Location . End  10367296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07E3.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007416 ceh-57 C07E3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07E3.5 C07E3.5 1032   II: 10363706-10363726

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07E3.5.2 10363584 10367296 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66037   143   II: 10363584-10363726 Caenorhabditis elegans
Exon66039   51   II: 10363795-10363845 Caenorhabditis elegans
Exon66042   96   II: 10363930-10364025 Caenorhabditis elegans
Exon66045   85   II: 10364290-10364374 Caenorhabditis elegans
Exon66048   79   II: 10364635-10364713 Caenorhabditis elegans
Exon66051   565   II: 10364772-10365336 Caenorhabditis elegans
Exon66054   59   II: 10365383-10365441 Caenorhabditis elegans
Exon66057   38   II: 10365497-10365534 Caenorhabditis elegans
Exon66061   1292   II: 10365590-10366881 Caenorhabditis elegans
Exon66063   77   II: 10367220-10367296 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07E3.5.2 10363584 10367296 -1

1 Sequence

Length
2485

1 Sequence Ontology Term

Identifier Name Description
transcript