WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09F3.1.1 Sequence Name  T09F3.1.1
Length (nt)  1457   Chromosome Location  II: 10385333-10388133
Chromosome . Primary Identifier  II Chromosome Location . Start  10385333
Chromosome Location . End  10388133 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09F3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011661 ztf-27 T09F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09F3.1 T09F3.1 1068   II: 10385353-10385412

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09F3.1.1 10385333 10388133 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66076   80   II: 10385333-10385412 Caenorhabditis elegans
Exon66077   306   II: 10385693-10385998 Caenorhabditis elegans
Exon66078   198   II: 10386502-10386699 Caenorhabditis elegans
Exon66079   170   II: 10386744-10386913 Caenorhabditis elegans
Exon66080   99   II: 10386982-10387080 Caenorhabditis elegans
Exon66081   604   II: 10387530-10388133 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09F3.1.1 10385333 10388133 1

1 Sequence

Length
1457

1 Sequence Ontology Term

Identifier Name Description
transcript