WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R166.1a Sequence Name  R166.1a
Length (nt)  1749   Chromosome Location  II: 10530422-10530503
Chromosome . Primary Identifier  II Chromosome Location . Start  10530422
Chromosome Location . End  10530503
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R166.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43283 MAB-10, isoform a 61.8 582 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051997
WBRNAi00017883
WBRNAi00034946

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R166.1a 10530422 10530503 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003107 mab-10 R166.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:R166.1a 10530422 10530503 1
CDS:R166.1a 10530550 10530694 1
CDS:R166.1a 10530756 10530862 1
CDS:R166.1a 10530913 10531308 1
CDS:R166.1a 10531670 10532095 1
CDS:R166.1a 10532502 10532637 1
CDS:R166.1a 10532686 10533073 1
CDS:R166.1a 10533438 10533506 1

1 Sequence

Length
1749

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R166.1a.1 R166.1a.1 2872   II: 10528084-10534380
Transcript:R166.1a.2 R166.1a.2 2710   II: 10530335-10534380