WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R166.2.1 Sequence Name  R166.2.1
Length (nt)  2065   Chromosome Location  II: 10534332-10537671
Chromosome . Primary Identifier  II Chromosome Location . Start  10534332
Chromosome Location . End  10537671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R166.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011302 R166.2 R166.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R166.2 R166.2 1857   II: 10534539-10534733

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R166.2.1 10534332 10537671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66355   402   II: 10534332-10534733 Caenorhabditis elegans
Exon66356   1041   II: 10535038-10536078 Caenorhabditis elegans
Exon66357   129   II: 10536133-10536261 Caenorhabditis elegans
Exon66358   138   II: 10537027-10537164 Caenorhabditis elegans
Exon66359   96   II: 10537212-10537307 Caenorhabditis elegans
Exon66360   135   II: 10537361-10537495 Caenorhabditis elegans
Exon66361   124   II: 10537548-10537671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R166.2.1 10534332 10537671 -1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript