WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R166.3.1 Sequence Name  R166.3.1
Length (nt)  728   Chromosome Location  II: 10537801-10539332
Chromosome . Primary Identifier  II Chromosome Location . Start  10537801
Chromosome Location . End  10539332 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R166.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011303 R166.3 R166.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R166.3 R166.3 603   II: 10537926-10537973

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R166.3.1 10537801 10539332 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66362   173   II: 10537801-10537973 Caenorhabditis elegans
Exon66363   270   II: 10538494-10538763 Caenorhabditis elegans
Exon66364   100   II: 10538809-10538908 Caenorhabditis elegans
Exon66365   75   II: 10538960-10539034 Caenorhabditis elegans
Exon66366   110   II: 10539223-10539332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R166.3.1 10537801 10539332 -1

1 Sequence

Length
728

1 Sequence Ontology Term

Identifier Name Description
transcript