WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M28.4 Sequence Name  M28.4
Length (nt)  2328   Chromosome Location  II: 10643703-10643903
Chromosome . Primary Identifier  II Chromosome Location . Start  10643703
Chromosome Location . End  10643903
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M28.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53950 M28.4 86.0 775 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051021
WBRNAi00017250

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:M28.4 10643703 10643903 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010895 M28.4 M28.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:M28.4 10643703 10643903 1
CDS:M28.4 10643950 10644138 1
CDS:M28.4 10644189 10644345 1
CDS:M28.4 10644533 10644693 1
CDS:M28.4 10644737 10644895 1
CDS:M28.4 10645118 10645201 1
CDS:M28.4 10645248 10645406 1
CDS:M28.4 10645451 10645574 1
CDS:M28.4 10645626 10645866 1
CDS:M28.4 10645917 10646097 1
CDS:M28.4 10646142 10646324 1
CDS:M28.4 10646371 10646451 1
CDS:M28.4 10646495 10646695 1
CDS:M28.4 10646740 10646946 1

1 Sequence

Length
2328

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M28.4.1 M28.4.1 2360   II: 10643703-10646978