WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2089.1b Sequence Name  D2089.1b
Length (nt)  414   Chromosome Location  II: 10659210-10659329
Chromosome . Primary Identifier  II Chromosome Location . Start  10659210
Chromosome Location . End  10659329
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2089.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30507 RSP-7, isoform b 15.3 137 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043508
WBRNAi00030421

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2089.1b 10659210 10659329 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004704 rsp-7 D2089.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2089.1b 10659210 10659329 1
CDS:D2089.1b 10659398 10659548 1
CDS:D2089.1b 10659597 10659715 1
CDS:D2089.1b 10659787 10659810 1

1 Sequence

Length
414

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2089.1b.1 D2089.1b.1 1803   II: 10659206-10662317
Transcript:D2089.1b.2 D2089.1b.2 1632   II: 10659208-10662317