WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G5.8b.1 Sequence Name  C09G5.8b.1
Length (nt)  3279   Chromosome Location  II: 10721645-10729250
Chromosome . Primary Identifier  II Chromosome Location . Start  10721645
Chromosome Location . End  10729250 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G5.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007490 mks-5 C09G5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G5.8b C09G5.8b 3279   II: 10721645-10721883

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G5.8b.1 10721645 10729250 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66746   239   II: 10721645-10721883 Caenorhabditis elegans
Exon66748   261   II: 10722197-10722457 Caenorhabditis elegans
Exon66751   295   II: 10723826-10724120 Caenorhabditis elegans
Exon66753   171   II: 10724172-10724342 Caenorhabditis elegans
Exon66755   219   II: 10724580-10724798 Caenorhabditis elegans
Exon66757   219   II: 10724981-10725199 Caenorhabditis elegans
Exon66759   270   II: 10726493-10726762 Caenorhabditis elegans
Exon66761   450   II: 10726916-10727365 Caenorhabditis elegans
Exon66763   104   II: 10727413-10727516 Caenorhabditis elegans
Exon66765   470   II: 10727563-10728032 Caenorhabditis elegans
Exon66767   327   II: 10728198-10728524 Caenorhabditis elegans
Exon66769   171   II: 10728946-10729116 Caenorhabditis elegans
Exon66771   83   II: 10729168-10729250 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G5.8b.1 10721645 10729250 1

1 Sequence

Length
3279

1 Sequence Ontology Term

Identifier Name Description
transcript