WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52A11.4d.1 Sequence Name  C52A11.4d.1
Length (nt)  7269   Chromosome Location  II: 10739275-10778126
Chromosome . Primary Identifier  II Chromosome Location . Start  10739275
Chromosome Location . End  10778126 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52A11.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003404 mpz-1 C52A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52A11.4d C52A11.4d 7269   II: 10739275-10739358

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52A11.4d.1 10739275 10778126 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

43 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66792   84   II: 10739275-10739358 Caenorhabditis elegans
Exon66795   147   II: 10739660-10739806 Caenorhabditis elegans
Exon66804   141   II: 10739853-10739993 Caenorhabditis elegans
Exon66813   309   II: 10740130-10740438 Caenorhabditis elegans
Exon66824   84   II: 10741137-10741220 Caenorhabditis elegans
Exon66831   599   II: 10741497-10742095 Caenorhabditis elegans
Exon66841   67   II: 10742488-10742554 Caenorhabditis elegans
Exon66849   93   II: 10746348-10746440 Caenorhabditis elegans
Exon66857   202   II: 10746694-10746895 Caenorhabditis elegans
Exon66865   926   II: 10747055-10747980 Caenorhabditis elegans
Exon66873   234   II: 10748244-10748477 Caenorhabditis elegans
Exon66882   570   II: 10748528-10749097 Caenorhabditis elegans
Exon66889   75   II: 10749856-10749930 Caenorhabditis elegans
Exon66896   120   II: 10751054-10751173 Caenorhabditis elegans
Exon66903   127   II: 10751222-10751348 Caenorhabditis elegans
Exon66910   99   II: 10751463-10751561 Caenorhabditis elegans
Exon66917   107   II: 10751725-10751831 Caenorhabditis elegans
Exon66924   181   II: 10752126-10752306 Caenorhabditis elegans
Exon66932   77   II: 10752356-10752432 Caenorhabditis elegans
Exon66938   57   II: 10753531-10753587 Caenorhabditis elegans
Exon66944   75   II: 10754011-10754085 Caenorhabditis elegans
Exon66950   87   II: 10754430-10754516 Caenorhabditis elegans
Exon66956   85   II: 10756732-10756816 Caenorhabditis elegans
Exon66962   134   II: 10757050-10757183 Caenorhabditis elegans
Exon66969   286   II: 10757494-10757779 Caenorhabditis elegans
Exon66976   521   II: 10757953-10758473 Caenorhabditis elegans
Exon66983   92   II: 10758889-10758980 Caenorhabditis elegans
Exon66991   124   II: 10759359-10759482 Caenorhabditis elegans
Exon66998   146   II: 10759604-10759749 Caenorhabditis elegans
Exon67005   152   II: 10759793-10759944 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52A11.4d.1 10739275 10778126 -1

1 Sequence

Length
7269

1 Sequence Ontology Term

Identifier Name Description
transcript