WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19E10.1b.1 Sequence Name  T19E10.1b.1
Length (nt)  3380   Chromosome Location  II: 10778389-10783293
Chromosome . Primary Identifier  II Chromosome Location . Start  10778389
Chromosome Location . End  10783293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19E10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002297 ect-2 T19E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E10.1b T19E10.1b 2799   II: 10778942-10779092

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19E10.1b.1 10778389 10783293 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67082   704   II: 10778389-10779092 Caenorhabditis elegans
Exon67085   130   II: 10779481-10779610 Caenorhabditis elegans
Exon67088   142   II: 10779673-10779814 Caenorhabditis elegans
Exon67089   76   II: 10779909-10779984 Caenorhabditis elegans
Exon67094   428   II: 10780033-10780460 Caenorhabditis elegans
Exon67097   126   II: 10780511-10780636 Caenorhabditis elegans
Exon67100   79   II: 10780685-10780763 Caenorhabditis elegans
Exon67103   506   II: 10780819-10781324 Caenorhabditis elegans
Exon67106   339   II: 10781707-10782045 Caenorhabditis elegans
Exon67109   216   II: 10782119-10782334 Caenorhabditis elegans
Exon67112   102   II: 10782387-10782488 Caenorhabditis elegans
Exon67115   54   II: 10782601-10782654 Caenorhabditis elegans
Exon67118   141   II: 10782707-10782847 Caenorhabditis elegans
Exon67121   186   II: 10782894-10783079 Caenorhabditis elegans
Exon67124   151   II: 10783143-10783293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19E10.1b.1 10778389 10783293 -1

1 Sequence

Length
3380

1 Sequence Ontology Term

Identifier Name Description
transcript